ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A5UJX4_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A5UJX4_F1_nD1

A5UJX4_F1_nD1

UID: 004952592

AlphaFold

Range: 1-140
AlphaFold: AF-A5UJX4
UniProt: A5UJX4 (all domains)
Gene: Msm_0297

Protein: Predicted exosome subunit

3D Structure

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Related Domains

Browse other domains in RNA_binding →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibosomal protein L5(882)

HH-groupRibosomal protein L5(882.1)

TT-groupRibosomal protein L5(882.1.1)

FFamilyRNA_binding(882.1.1.4)

Pfam Families

PF01877RNA_binding

RNA binding

External Links

AlphaFold DB: A5UJX4 UniProt: A5UJX4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-140