ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A5UKP8_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A5UKP8_F1_nD2

A5UKP8_F1_nD2

UID: 004952963

AlphaFold

Range: 396-500
AlphaFold: AF-A5UKP8
UniProt: A5UKP8 (all domains)
Gene: Msm_0571

Protein: 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC

3D Structure

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Related Domains

Browse other domains in Fibrillarin_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyFibrillarin_2(2003.1.1.311)

Pfam Families

PF10113Fibrillarin_2

FeGP cofactor biosynthesis protein, fibrillarin family

ClanCL0036TIM_barrel

External Links

AlphaFold DB: A5UKP8 UniProt: A5UKP8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 396-500