ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A5UMJ4_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A5UMJ4_F1_nD1

A5UMJ4_F1_nD1

UID: 004953911

AlphaFold

Range: 1-115
AlphaFold: AF-A5UMJ4
UniProt: A5UMJ4 (all domains)
Gene: Msm_1217

Protein: Type II restriction endonuclease

3D Structure

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Related Domains

Browse other domains in Mrr_cat →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyMrr_cat(2008.1.1.16)

Pfam Families

PF04471Mrr_cat

Restriction endonuclease

ClanCL0236PDDEXK

External Links

AlphaFold DB: A5UMJ4 UniProt: A5UMJ4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-115