ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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B1L6Z5_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/B1L6Z5_F1_nD4

B1L6Z5_F1_nD4

UID: 004956652

AlphaFold

Range: 266-358
AlphaFold: AF-B1L6Z5
UniProt: B1L6Z5 (all domains)
Gene: Kcr_1478

Protein: tRNA intron endonuclease

3D Structure

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Related Domains

Browse other domains in tRNA_int_endo →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-grouptRNA-intron endonuclease catalytic domain-like(2008.2)

TT-grouptRNA-intron endonuclease catalytic domain-like(2008.2.1)

FFamilytRNA_int_endo(2008.2.1.1)

Pfam Families

PF01974tRNA_int_endo

tRNA intron endonuclease, catalytic C-terminal domain

ClanCL0236PDDEXK

External Links

AlphaFold DB: B1L6Z5 UniProt: B1L6Z5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 266-358