ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1mn8A1 - ECOD Domain | ECOD

ECOD/Domains/e1mn8A1

e1mn8A1

UID: 000049792

PDB

Range: A:3-97
PDB: 1MN8 chain A(all domains)
UniProt: P03332 (all domains)
Gene: gag

Molecule: Gag polyprotein (Pr65gag) (Core polyprotein) [Cleaved into: Matrix protein p15 (MA); RNA-binding phosphoprotein p12 (pp12); Capsid protein p30 (CA); Nucleocapsid protein p10-Gag (NC-gag)]

3D Structure

Loading viewer...

Related Domains

Browse other domains in Gag_MA →

Classification

AArchitecturealpha arrays(a.6)

XX-groupRetroviral matrix proteins(612)

HH-groupRetroviral matrix proteins(612.1)

TT-groupRetroviral matrix proteins(612.1.1)

FFamilyGag_MA(612.1.1.2)

Pfam Families

Matrix protein (MA), p15

ClanCL0074Matrix

External Links

ECOD PDB View: 1MN8 RCSB PDB: 1MN8 PDBe: 1MN8 UniProt: P03332

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure