ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

O27966_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/O27966_F1_nD1

O27966_F1_nD1

UID: 005005375

AlphaFold

Range: 1-140
AlphaFold: AF-O27966
UniProt: O27966 (all domains)
Gene: AF_2318

Protein: Exosome subunit

3D Structure

Loading viewer...

Related Domains

Browse other domains in RNA_binding →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibosomal protein L5(882)

HH-groupRibosomal protein L5(882.1)

TT-groupRibosomal protein L5(882.1.1)

FFamilyRNA_binding(882.1.1.4)

Pfam Families

PF01877RNA_binding

RNA binding

External Links

AlphaFold DB: O27966 UniProt: O27966

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-140