ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

O28411_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/O28411_F1_nD1

O28411_F1_nD1

UID: 005005969

AlphaFold

Range: 1-200
AlphaFold: AF-O28411
UniProt: O28411 (all domains)
Gene: AF_1868

Protein: Type III-B CRISPR module RAMP protein Cmr1

3D Structure

Loading viewer...

Related Domains

Browse other domains in RAMPs →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupCRISPR transcript (pre-crRNA) processing endoribonuclease-related(304.51)

TT-groupCRISPR transcript (pre-crRNA) processing endoribonuclease-related(304.51.1)

FFamilyRAMPs(304.51.1.2)

Pfam Families

RAMP superfamily

ClanCL0362RAMPS-Cas5-like

External Links

AlphaFold DB: O28411 UniProt: O28411

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-200