ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O28411_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/O28411_F1_nD2

O28411_F1_nD2

UID: 005005970

AlphaFold

Range: 201-329
AlphaFold: AF-O28411
UniProt: O28411 (all domains)
Gene: AF_1868

Protein: Type III-B CRISPR module RAMP protein Cmr1

3D Structure

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Related Domains

Browse other domains in Cmr1_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupCRISPR transcript (pre-crRNA) processing endoribonuclease-related(304.51)

TT-groupCRISPR transcript (pre-crRNA) processing endoribonuclease-related(304.51.1)

FFamilyCmr1_C(304.51.1.15)

Pfam Families

Cmr1, C-terminal domain

ClanCL0362RAMPS-Cas5-like

External Links

AlphaFold DB: O28411 UniProt: O28411

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 201-329