ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q4J9M1_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q4J9M1_F1_nD2

Q4J9M1_F1_nD2

UID: 005010831

AlphaFold

Range: 106-260
AlphaFold: AF-Q4J9M1
UniProt: Q4J9M1 (all domains)
Gene: Saci_1161

Protein: HTH domain protein

3D Structure

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Related Domains

Browse other domains in Regulator_TrmB →

Classification

AArchitecturea+b three layers(a.12)

XX-groupPhospholipase D/nuclease(300)

HH-groupPhospholipase D/nuclease(300.1)

TT-groupPhospholipase D/nuclease(300.1.1)

FFamilyRegulator_TrmB(300.1.1.6)

Pfam Families

PF11495TrmB_EBD_N

Transcriptional regulator TrmB, EBD N-terminal subdomaim

ClanCL0479PLD

External Links

AlphaFold DB: Q4J9M1 UniProt: Q4J9M1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 106-260