ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q4J9M1_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q4J9M1_F1_nD3

Q4J9M1_F1_nD3

UID: 005010832

AlphaFold

Range: 261-349
AlphaFold: AF-Q4J9M1
UniProt: Q4J9M1 (all domains)
Gene: Saci_1161

Protein: HTH domain protein

3D Structure

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Related Domains

Browse other domains in TrmB-TrmBL1_EBD_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupTrmB C-terminal domain-like(4.15)

TT-groupTrmB C-terminal domain-like(4.15.1)

FFamilyTrmB-TrmBL1_EBD_C(4.15.1.2)

Pfam Families

PF31112TrmB-TrmBL1_EBD_C

TrmB/TrmBL1, EBD C-terminal subdomain

External Links

AlphaFold DB: Q4J9M1 UniProt: Q4J9M1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 261-349