ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q4JAM1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q4JAM1_F1_nD1

Q4JAM1_F1_nD1

UID: 005011323

AlphaFold

Range: 1-170,176-225
AlphaFold: AF-Q4JAM1
UniProt: Q4JAM1 (all domains)
Gene: lig

Protein: DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])

3D Structure

Loading viewer...

Related Domains

Browse other domains in DNA_ligase_A_N →

Classification

AArchitecturealpha bundles(a.7)

XX-groupATP-dependent DNA ligase DNA-binding domain(4095)

HH-groupATP-dependent DNA ligase DNA-binding domain(4095.1)

TT-groupATP-dependent DNA ligase DNA-binding domain(4095.1.1)

FFamilyDNA_ligase_A_N(4095.1.1.1)

Pfam Families

PF04675DNA_ligase_A_N

DNA ligase N terminus

External Links

AlphaFold DB: Q4JAM1 UniProt: Q4JAM1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-170,176-225