ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q50249_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q50249_F1_nD1

Q50249_F1_nD1

UID: 005012165

AlphaFold

Range: 86-355,401-475
AlphaFold: AF-Q50249
UniProt: Q50249 (all domains)
Gene: vhoA

Protein: F420 non-reducing hydrogenase I large subunit (EC 1.12.98.3) (F420-nonreactive hydrogenase I large subunit) (Methanosarcina-phenazine hydrogenase I large subunit)

3D Structure

Loading viewer...

Related Domains

Browse other domains in NiFeSe_Hases →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupalpha-helical domain in nickel-iron hydrogenase, large subunit(4025)

HH-groupalpha-helical domain in nickel-iron hydrogenase, large subunit(4025.1)

TT-groupalpha-helical domain in nickel-iron hydrogenase, large subunit(4025.1.1)

FFamilyNiFeSe_Hases(4025.1.1.2)

Pfam Families

PF00374NiFeSe_Hases

Nickel-dependent hydrogenase

External Links

AlphaFold DB: Q50249 UniProt: Q50249

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 86-355,401-475