ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5JD39_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5JD39_F1_nD1

Q5JD39_F1_nD1

UID: 005012274

AlphaFold

Range: 1-465
AlphaFold: AF-Q5JD39
UniProt: Q5JD39 (all domains)
Gene: TK0450

Protein: DEAD/DEAH box helicase

3D Structure

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Related Domains

Browse other domains in Cas3-like_C_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyCas3-like_C_2(2004.1.1.233)

Pfam Families

PF22590Cas3-like_C_2

CRISPR-associated nuclease/helicase Cas3, C-terminal

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: Q5JD39 UniProt: Q5JD39

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-465