ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5JD70_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5JD70_F1_nD1

Q5JD70_F1_nD1

UID: 005012313

AlphaFold

Range: 1-55
AlphaFold: AF-Q5JD70
UniProt: Q5JD70 (all domains)
Gene: TK0497

Protein: tRNA (guanine(37)-N(1))-methyltransferase Trm5b (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)

3D Structure

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Related Domains

Browse other domains in Trm5_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupEF-G C-terminal domain-like(304.24)

TT-groupEF-G C-terminal domain-like(304.24.1)

FFamilyTrm5_N(304.24.1.5)

Pfam Families

tRNA methyltransferase 5 N-terminal domain

ClanCL0437EF-G_C

External Links

AlphaFold DB: Q5JD70 UniProt: Q5JD70

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-55