ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q5JD70_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5JD70_F1_nD2

Q5JD70_F1_nD2

UID: 005012314

AlphaFold

Range: 81-330
AlphaFold: AF-Q5JD70
UniProt: Q5JD70 (all domains)
Gene: TK0497

Protein: tRNA (guanine(37)-N(1))-methyltransferase Trm5b (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Met_10 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMet_10(2003.1.5.24)

Pfam Families

PF02475TRM5-TYW2_MTfase

TRM5/TYW2 methyltransferase domain

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: Q5JD70 UniProt: Q5JD70

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 81-330