ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5JDA2_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5JDA2_F1_nD1

Q5JDA2_F1_nD1

UID: 005012353

AlphaFold

Range: 1-75
AlphaFold: AF-Q5JDA2
UniProt: Q5JDA2 (all domains)
Gene: TK2286

Protein: snoRNP component, Gar1 homolog

3D Structure

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Related Domains

Browse other domains in Gar1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupAlanine racemase-C(1.1.7)

FFamilyGar1(1.1.7.20)

Pfam Families

Gar1/Naf1 RNA binding region

ClanCL0866ALR_C-like

External Links

AlphaFold DB: Q5JDA2 UniProt: Q5JDA2

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-75