ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5JDX8_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5JDX8_F1_nD1

Q5JDX8_F1_nD1

UID: 005012643

AlphaFold

Range: 1-140
AlphaFold: AF-Q5JDX8
UniProt: Q5JDX8 (all domains)
Gene: TK1029

Protein: GIY-YIG domain-containing protein

3D Structure

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Related Domains

Browse other domains in DUF123 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupGIY-YIG endonuclease(821)

HH-groupGIY-YIG endonuclease(821.1)

TT-groupGIY-YIG endonuclease(821.1.1)

FFamilyDUF123(821.1.1.4)

Pfam Families

Domain of unknown function DUF123

ClanCL0418GIY-YIG

External Links

AlphaFold DB: Q5JDX8 UniProt: Q5JDX8

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-140