ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5JDY1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5JDY1_F1_nD1

Q5JDY1_F1_nD1

UID: 005012645

AlphaFold

Range: 6-250
AlphaFold: AF-Q5JDY1
UniProt: Q5JDY1 (all domains)
Gene: TK1026

Protein: Geranylgeranylglyceryl phosphate synthase (GGGP synthase) (GGGPS) (EC 2.5.1.41) ((S)-3-O-geranylgeranylglyceryl phosphate synthase) (Phosphoglycerol geranylgeranyltransferase)

3D Structure

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Related Domains

Browse other domains in PcrB →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyPcrB(2002.1.1.78)

Pfam Families

PcrB family

ClanCL0036TIM_barrel

External Links

AlphaFold DB: Q5JDY1 UniProt: Q5JDY1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-250