ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q5JER7_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5JER7_F1_nD1

Q5JER7_F1_nD1

UID: 005013003

AlphaFold

Range: 16-360
AlphaFold: AF-Q5JER7
UniProt: Q5JER7 (all domains)
Gene: TK1884

Protein: Alpha-amylase, GH13 family

3D Structure

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Related Domains

Browse other domains in Alpha-amylase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAlpha-amylase(2002.1.1.4)

Pfam Families

PF00128Alpha-amylase

Alpha amylase, catalytic domain

ClanCL0036TIM_barrel

External Links

AlphaFold DB: Q5JER7 UniProt: Q5JER7

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 16-360