ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q5JF46_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q5JF46_F1_nD4

Q5JF46_F1_nD4

UID: 005013181

AlphaFold

Range: 351-385
AlphaFold: AF-Q5JF46
UniProt: Q5JF46 (all domains)
Gene: tiaS

Protein: tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS (tRNA(Ile2)-agm2C synthetase) (EC 6.3.4.22) (tRNA(Ile2) agmatidine synthetase)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Zn_ribbon_TiaS →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyZn_ribbon_TiaS(375.1.1.213)

Pfam Families

PF23783Zn_ribbon_TiaS

TiaS C-terminal zinc ribbon domain

ClanCL0167Zn_Beta_Ribbon

External Links

AlphaFold DB: Q5JF46 UniProt: Q5JF46

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 351-385