ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5JGA6_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5JGA6_F1_nD1

Q5JGA6_F1_nD1

UID: 005013697

AlphaFold

Range: 6-170
AlphaFold: AF-Q5JGA6
UniProt: Q5JGA6 (all domains)
Gene: TK0458

Protein: CRISPR-associated exonuclease Cas4 (EC 3.1.12.1)

3D Structure

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Related Domains

Browse other domains in Cas_Cas4 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyCas_Cas4(2008.1.1.4)

Pfam Families

PF01930Cas_Cas4

Domain of unknown function DUF83

ClanCL0236PDDEXK

External Links

AlphaFold DB: Q5JGA6 UniProt: Q5JGA6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-170