ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5JGA8_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5JGA8_F1_nD1

Q5JGA8_F1_nD1

UID: 005013699

AlphaFold

Range: 1-135
AlphaFold: AF-Q5JGA8
UniProt: Q5JGA8 (all domains)
Gene: vapC

Protein: Ribonuclease VapC (RNase VapC) (EC 3.1.-.-) (Putative toxin VapC)

3D Structure

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Related Domains

Browse other domains in PIN →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupPIN domain-like(2006.1.4)

FFamilyPIN(2006.1.4.2)

Pfam Families

PIN domain

ClanCL0280PIN

External Links

AlphaFold DB: Q5JGA8 UniProt: Q5JGA8

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-135