ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5JGM1_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q5JGM1_F1_nD3

Q5JGM1_F1_nD3

UID: 005013848

AlphaFold

Range: 151-355
AlphaFold: AF-Q5JGM1
UniProt: Q5JGM1 (all domains)
Gene: TK1257

Protein: RNA-binding protein, containing THUMP domain

3D Structure

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Related Domains

Browse other domains in SPOUT_MTase_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta knot(2488)

HH-groupalpha/beta knot(2488.1)

TT-groupalpha/beta knot(2488.1.1)

FFamilySPOUT_MTase_2(2488.1.1.16)

Pfam Families

PF14419SPOUT_MTase_2

AF2226-like SPOUT RNA Methylase fused to THUMP

ClanCL0098SPOUT

External Links

AlphaFold DB: Q5JGM1 UniProt: Q5JGM1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 151-355