ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5JIR5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5JIR5_F1_nD1

Q5JIR5_F1_nD1

UID: 005014827

AlphaFold

Range: 1-55
AlphaFold: AF-Q5JIR5
UniProt: Q5JIR5 (all domains)
Gene: rrp4

Protein: Exosome complex component Rrp4

3D Structure

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Related Domains

Browse other domains in ECR1_N_2 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325)

HH-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325.1)

TT-groupRibosomal L27 protein(325.1.8)

FFamilyECR1_N_2(325.1.8.6)

Pfam Families

PF22625ECR1_N_2

Exosome RNA binding protein RRP4 N-terminal domain

ClanCL0105Hybrid

External Links

AlphaFold DB: Q5JIR5 UniProt: Q5JIR5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-55