ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q6LZE1_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q6LZE1_F1_nD2

Q6LZE1_F1_nD2

UID: 005016662

AlphaFold

Range: 346-535
AlphaFold: AF-Q6LZE1
UniProt: Q6LZE1 (all domains)
Gene: sepS

Protein: O-phosphoserine--tRNA(Cys) ligase (O-phosphoserine--tRNA ligase) (EC 6.1.1.27) (Non-canonical O-phosphoseryl-tRNA(Cys) synthetase) (O-phosphoseryl-tRNA(Cys) synthetase) (SepRS)

3D Structure

Loading viewer...

Related Domains

Browse other domains in SepRS_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupO-phosphoseryl-tRNA synthetase C-terminal domain(304.135)

TT-groupO-phosphoseryl-tRNA synthetase C-terminal domain(304.135.1)

FFamilySepRS_C(304.135.1.1)

Pfam Families

PF18006SepRS_C

O-phosphoseryl-tRNA synthetase C-terminal domain

External Links

AlphaFold DB: Q6LZE1 UniProt: Q6LZE1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 346-535