ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8PUB6_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q8PUB6_F1_nD2

Q8PUB6_F1_nD2

UID: 005018935

AlphaFold

Range: 221-395
AlphaFold: AF-Q8PUB6
UniProt: Q8PUB6 (all domains)
Gene: gyrB

Protein: DNA gyrase subunit B (EC 5.6.2.2)

3D Structure

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Related Domains

Browse other domains in DNA_gyraseB →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibosomal protein S5 domain 2-like(212)

HH-groupRibosomal protein S5 domain 2-like(212.1)

TT-groupRibosomal protein S5 domain 2-like(212.1.1)

FFamilyDNA_gyraseB(212.1.1.2)

Pfam Families

PF00204DNA_gyraseB

DNA gyrase B

ClanCL0329S5

External Links

AlphaFold DB: Q8PUB6 UniProt: Q8PUB6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 221-395