ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8PUP0_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8PUP0_F1_nD1

Q8PUP0_F1_nD1

UID: 005019093

AlphaFold

Range: 1-240
AlphaFold: AF-Q8PUP0
UniProt: Q8PUP0 (all domains)
Gene: MM_2292

Protein: type I site-specific deoxyribonuclease (EC 3.1.21.3)

3D Structure

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Related Domains

Browse other domains in HSDR_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyHSDR_N(2008.1.1.15)

Pfam Families

Type I restriction enzyme R protein N terminus (HSDR_N)

ClanCL0236PDDEXK

External Links

AlphaFold DB: Q8PUP0 UniProt: Q8PUP0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-240