ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q9HKX5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9HKX5_F1_nD1

Q9HKX5_F1_nD1

UID: 005025813

AlphaFold

Range: 1-110
AlphaFold: AF-Q9HKX5
UniProt: Q9HKX5 (all domains)
Gene: serS

Protein: Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Seryl_tRNA_N →

Classification

AArchitecturealpha bundles(a.7)

XX-groupLong alpha-hairpin(192)

HH-grouptRNA-binding arm(192.7)

TT-grouptRNA-binding arm(192.7.1)

FFamilySeryl_tRNA_N(192.7.1.2)

Pfam Families

PF02403Seryl_tRNA_N

Seryl-tRNA synthetase N-terminal domain

ClanCL0298tRNA_bind_arm

External Links

AlphaFold DB: Q9HKX5 UniProt: Q9HKX5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-110