ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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A0A0B5I3K5_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A0B5I3K5_F1_nD2

A0A0B5I3K5_F1_nD2

UID: 005028784

AlphaFold

Range: 51-290
AlphaFold: AF-A0A0B5I3K5
UniProt: A0A0B5I3K5 (all domains)

3D Structure

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Related Domains

Browse other domains in rve_3 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyrve_3(2484.1.1.117)

Pfam Families

Integrase core domain

ClanCL0219RNase_H

External Links

AlphaFold DB: A0A0B5I3K5 UniProt: A0A0B5I3K5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 51-290