ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A5C9E4U8_F1_nD7 - ECOD Domain | ECOD

ECOD/Domains/A0A5C9E4U8_F1_nD7

A0A5C9E4U8_F1_nD7

UID: 005048457

AlphaFold

Range: 461-470,676-855
AlphaFold: AF-A0A5C9E4U8
UniProt: A0A5C9E4U8 (all domains)

3D Structure

Loading viewer...

Related Domains

Browse other domains in TOP6A-Spo11_Toprim →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupToprim domain(2006.1.3)

FFamilyTOP6A-Spo11_Toprim(2006.1.3.11)

Pfam Families

PF21180TOP6A-Spo11_Toprim

Topoisomerase 6 subunit A/Spo11, Toprim domain

ClanCL0413Toprim-like

External Links

AlphaFold DB: A0A5C9E4U8 UniProt: A0A5C9E4U8

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 461-470,676-855