ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
RCSB PDB
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UPI00274B5E4C_nD1 - ECOD Domain | ECOD

ECOD/Domains/UPI00274B5E4C_nD1

UPI00274B5E4C_nD1

UID: 005059197

AlphaFold

Range: 1-140
AlphaFold: AF-UPI00274B5E4C
UniProt: UPI00274B5E4C (all domains)

3D Structure

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Related Domains

Browse other domains in Y1_Tnp →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupOrigin of replication-binding domains(304.55)

TT-groupTransposase IS200-like(304.55.2)

FFamilyY1_Tnp(304.55.2.1)

Pfam Families

Transposase IS200 like

ClanCL0481HUH

External Links

AlphaFold DB: UPI00274B5E4C UniProt: UPI00274B5E4C

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-140