ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1f8vC1 - ECOD Domain | ECOD

ECOD/Domains/e1f8vC1

e1f8vC1

UID: 005087673

PDB

Range: C:1-355
PDB: 1F8V chain C(all domains)
UniProt: Q9J7Z0 (all domains)
Gene: alpha

Molecule: Capsid protein alpha (EC 3.4.23.44) [Cleaved into: Capsid protein beta (Coat protein beta) (Nodavirus endopeptidase); Membrane-lytic peptide gamma (Coat protein gamma)]

3D Structure

Loading viewer...

Related Domains

Browse other domains in Peptidase_A6 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyPeptidase_A6(10.2.1.22)

Pfam Families

PF01829Peptidase_A6

Peptidase A6 family

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 1F8V RCSB PDB: 1F8V PDBe: 1F8V UniProt: Q9J7Z0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure