ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5gokB1 - ECOD Domain | ECOD

ECOD/Domains/e5gokB1

e5gokB1

UID: 005091580

PDB

Range: B:1-71
PDB: 5GOK chain B(all domains)
UniProt: Q9PST8 (all domains)
Gene: UbI

Molecule: Polyubiquitin

3D Structure

Loading viewer...

Related Domains

Browse other domains in ubiquitin →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyubiquitin(221.1.1.2)

Pfam Families

PF00240ubiquitin

Ubiquitin family

ClanCL0072Ubiquitin

External Links

ECOD PDB View: 5GOK RCSB PDB: 5GOK PDBe: 5GOK UniProt: Q9PST8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure