ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5o9z11 - ECOD Domain | ECOD

ECOD/Domains/e5o9z11

e5o9z11

UID: 005092175

PDB

Range: 1:3-96
PDB: 5O9Z chain 1(all domains)
UniProt: P08579 (all domains)
Gene: SNRPB2

Molecule: U2 small nuclear ribonucleoprotein B'' (U2 snRNP B'')

3D Structure

Loading viewer...

Related Domains

Browse other domains in RRM_1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyRRM_1(304.9.1.1)

Pfam Families

RNA recognition motif

ClanCL0221RRM

External Links

ECOD PDB View: 5O9Z RCSB PDB: 5O9Z PDBe: 5O9Z UniProt: P08579

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure