ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6oj5D1 - ECOD Domain | ECOD

ECOD/Domains/e6oj5D1

e6oj5D1

UID: 005097752

PDB

Range: D:94-887
PDB: 6OJ5 chain D(all domains)
UniProt: G0YZK0 (all domains)
Gene: VP2

Molecule: Inner capsid protein VP2

3D Structure

Loading viewer...

Related Domains

Browse other domains in Rota_VP2 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupInner layer core protein p3-related(4064)

HH-groupInner layer core protein p3-related(4064.1)

TT-groupInner layer core protein p3-related(4064.1.1)

FFamilyRota_VP2(4064.1.1.2)

Pfam Families

PF05087Rota_VP2

Rotavirus VP2 protein

External Links

ECOD PDB View: 6OJ5 RCSB PDB: 6OJ5 PDBe: 6OJ5 UniProt: G0YZK0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure