ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6ppdS1 - ECOD Domain | ECOD

ECOD/Domains/e6ppdS1

e6ppdS1

UID: 005098091

PDB

Range: S:535-1033
PDB: 6PPD chain S(all domains)
UniProt: D0UZN7 (all domains)
Gene: ORF25

Molecule: ORF25

3D Structure

Loading viewer...

Related Domains

Browse other domains in Herpes_MCP →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupMajor capsid protein VP5(4066)

HH-groupMajor capsid protein VP5(4066.1)

TT-groupMajor capsid protein VP5(4066.1.1)

FFamilyHerpes_MCP(4066.1.1.1)

Pfam Families

PF03122Herpes_MCP

Herpes virus major capsid protein

External Links

ECOD PDB View: 6PPD RCSB PDB: 6PPD PDBe: 6PPD UniProt: D0UZN7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure