ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6u05A1 - ECOD Domain | ECOD

ECOD/Domains/e6u05A1

e6u05A1

UID: 005100673

PDB

Range: A:9-230
PDB: 6U05 chain A(all domains)
UniProt: P43075 (all domains)
Gene: LIG1

Molecule: tRNA ligase (EC 6.5.1.3)

3D Structure

Loading viewer...

Related Domains

Browse other domains in tRNA_lig_kinase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilytRNA_lig_kinase(2004.1.1.284)

Pfam Families

PF08303tRNA_lig_kinase

tRNA ligase kinase domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 6U05 RCSB PDB: 6U05 PDBe: 6U05 UniProt: P43075

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure