ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e7r5jB11 - ECOD Domain | ECOD

ECOD/Domains/e7r5jB11

e7r5jB11

UID: 005117567

PDB

Range: B1:1-460,B1:488-490,B1:526-939
PDB: 7R5J chain B1(all domains)
UniProt: Q5SRE5 (all domains)
Gene: NUP188

Molecule: Nucleoporin NUP188 (hNup188)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Nup188_N,Nup188_N-subdom_III →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyNup188_N,Nup188_N-subdom_III(109.4.1.151)

Pfam Families

PF10487Nup188_N

Nucleoporin Nup188, N-terminal

ClanCL0020TPR

PF21093Nup188_N-subdom_III

Nucleoporin Nup188, N-terminal subdomain III

ClanCL0020TPR

External Links

ECOD PDB View: 7R5J RCSB PDB: 7R5J PDBe: 7R5J UniProt: Q5SRE5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure