ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8kajB2 - ECOD Domain | ECOD

ECOD/Domains/e8kajB2

e8kajB2

UID: 005154609

PDB

Range: B:58-718
PDB: 8KAJ chain B(all domains)
UniProt: Q99ZW2 (all domains)
Gene: cas9

Molecule: CRISPR-associated endonuclease Cas9/Csn1 (EC 3.1.-.-) (SpCas9) (SpyCas9)

3D Structure

Loading viewer...

Related Domains

Browse other domains in REC lobe of CRISPR-associated endonuclease Cas9 / Bridge helix of CRISPR-associated endonuclease Cas9 →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupCRISPR-associated endonuclease Cas9 alpha-helical lobe(3819)

HH-groupCRISPR-associated endonuclease Cas9 alpha-helical lobe(3819.1)

TT-groupCRISPR-associated endonuclease Cas9 alpha-helical lobe(3819.1.1)

FFamilyREC lobe of CRISPR-associated endonuclease Cas9 / Bridge helix of CRISPR-associated endonuclease Cas9(3819.1.1.2)

Pfam Families

PF16592Cas9_REC

REC lobe of CRISPR-associated endonuclease Cas9

ClanCL0693Cas9_lobe

PF16593Cas9-BH

Bridge helix of CRISPR-associated endonuclease Cas9

External Links

ECOD PDB View: 8KAJ RCSB PDB: 8KAJ PDBe: 8KAJ UniProt: Q99ZW2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure