ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8kgqB3 - ECOD Domain | ECOD

ECOD/Domains/e8kgqB3

e8kgqB3

UID: 005155649

PDB

Range: B:417-458,B:467-480,B:485-491,B:502-519,B:523-549,B:551-680,B:685-718
PDB: 8KGQ chain B(all domains)

3D Structure

Loading viewer...

Related Domains

Browse other domains in TOPRIM_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupSSHS domain(4012)

HH-groupSSHS domain in type II DNA topoisomerase(4012.1)

TT-groupSSHS domain in type II DNA topoisomerase(4012.1.1)

FFamilyTOPRIM_C(4012.1.1.1)

Pfam Families

PF16898TOPRIM_C

C-terminal associated domain of TOPRIM

External Links

ECOD PDB View: 8KGQ RCSB PDB: 8KGQ PDBe: 8KGQ

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure