ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8ppuB2 - ECOD Domain | ECOD

ECOD/Domains/e8ppuB2

e8ppuB2

UID: 005164946

PDB

Range: B:782-997
PDB: 8PPU chain B(all domains)
UniProt: Q9V2F4 (all domains)
Gene: polC

Molecule: DNA polymerase II large subunit (Pol II) (EC 2.7.7.7) (Exodeoxyribonuclease large subunit) (EC 3.1.11.1) [Cleaved into: Pab polC intein (Pab pol II intein)]

3D Structure

Loading viewer...

Related Domains

Browse other domains in PolC_DP2_cat →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupdouble psi(1.1.2)

FFamilyPolC_DP2_cat(1.1.2.23)

Pfam Families

PF24846PolC_DP2_cat

DNA polymerase II large subunit DP2, catalytic domain

External Links

ECOD PDB View: 8PPU RCSB PDB: 8PPU PDBe: 8PPU UniProt: Q9V2F4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure