ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8rm5A5 - ECOD Domain | ECOD

ECOD/Domains/e8rm5A5

e8rm5A5

UID: 005178889

PDB

Range: A:1503-1754
PDB: 8RM5 chain A(all domains)
UniProt: Q6P2Q9 (all domains)
Gene: PRPF8

Molecule: Pre-mRNA-processing-splicing factor 8 (220 kDa U5 snRNP-specific protein) (PRP8 homolog) (Splicing factor Prp8) (p220)

3D Structure

Loading viewer...

Related Domains

Browse other domains in U6-snRNA_bdg →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyU6-snRNA_bdg(2008.1.1.52)

Pfam Families

PF10596U6-snRNA_bdg

U6-snRNA interacting domain of PrP8

ClanCL0363H-int

External Links

ECOD PDB View: 8RM5 RCSB PDB: 8RM5 PDBe: 8RM5 UniProt: Q6P2Q9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure