ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8rm5U2 - ECOD Domain | ECOD

ECOD/Domains/e8rm5U2

e8rm5U2

UID: 005178928

PDB

Range: U:105-190
PDB: 8RM5 chain U(all domains)
UniProt: Q53GS9 (all domains)
Gene: USP39

Molecule: Ubiquitin carboxyl-terminal hydrolase 39 (EC 3.4.19.12) (SAD1 homolog) (U4/U6.U5 tri-snRNP-associated 65 kDa protein)

3D Structure

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Related Domains

Browse other domains in zf-UBP →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyzf-UBP(376.1.1.5)

Pfam Families

Zn-finger in ubiquitin-hydrolases and other protein

ClanCL0229RING

External Links

ECOD PDB View: 8RM5 RCSB PDB: 8RM5 PDBe: 8RM5 UniProt: Q53GS9

Downloads

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