ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8s54B1 - ECOD Domain | ECOD

ECOD/Domains/e8s54B1

e8s54B1

UID: 005182813

PDB

Range: B:182-334,B:351-355,B:373-380,B:531-666,B:672-673,B:677-685,B:730-736,B:751-757,B:786-793,B:811-816,B:965-968,B:997-1002,B:1007-1013,B:1022-1022,B:1036-1036
PDB: 8S54 chain B(all domains)

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupN-terminal domain in beta subunit of DNA dependent RNA-polymerase(4010)

HH-groupN-terminal domain in beta subunit of DNA dependent RNA-polymerase(4010.1)

TT-groupN-terminal domain in beta subunit of DNA dependent RNA-polymerase(4010.1.1)

FFamilyRNA_pol_Rpb2_1,RNA_pol_Rpb2_3(4010.1.1.2)

Pfam Families

PF04563RNA_pol_Rpb2_1

RNA polymerase beta subunit

PF04565RNA_pol_Rpb2_3

RNA polymerase Rpb2, domain 3

External Links

ECOD PDB View: 8S54 RCSB PDB: 8S54 PDBe: 8S54

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