ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8s54K1 - ECOD Domain | ECOD

ECOD/Domains/e8s54K1

e8s54K1

UID: 005182832

PDB

Range: K:1-115
PDB: 8S54 chain K(all domains)
UniProt: Q32P79 (all domains)
Gene: POLR2J

Molecule: DNA-directed RNA polymerase II subunit RPB11 (RNA polymerase II subunit B11) (DNA-directed RNA polymerase II subunit J)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupDCoH-like(305)

HH-groupRBP11-like subunits of RNA polymerase(305.1)

TT-groupRBP11-like subunits of RNA polymerase(305.1.1)

FFamilyRNA_pol_L_2(305.1.1.2)

Pfam Families

PF13656RNA_pol_L_2

RNA polymerase Rpb3/Rpb11 dimerisation domain

ClanCL0509RBP11-like

External Links

ECOD PDB View: 8S54 RCSB PDB: 8S54 PDBe: 8S54 UniProt: Q32P79

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