ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8uk311 - ECOD Domain | ECOD

ECOD/Domains/e8uk311

e8uk311

UID: 005200754

PDB

Range: 1:250-483
PDB: 8UK3 chain 1(all domains)
UniProt: C3RX20 (all domains)

Molecule: Outer capsid protein VP4 (Hemagglutinin) [Cleaved into: Outer capsid protein VP8*; Outer capsid protein VP5*]

3D Structure

Loading viewer...

Related Domains

Browse other domains in Rota_VP4_MID →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupVP4 membrane interaction domain(5091)

HH-groupVP4 membrane interaction domain(5091.1)

TT-groupVP4 membrane interaction domain(5091.1.1)

FFamilyRota_VP4_MID(5091.1.1.1)

Pfam Families

PF17477Rota_VP4_MID

Rotavirus VP4 membrane interaction domain

External Links

ECOD PDB View: 8UK3 RCSB PDB: 8UK3 PDBe: 8UK3 UniProt: C3RX20

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure