ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8v84q1 - ECOD Domain | ECOD

ECOD/Domains/e8v84q1

e8v84q1

UID: 005208488

PDB

Range: q:227-330
PDB: 8V84 chain q(all domains)
UniProt: P40991 (all domains)
Gene: NOP2

Molecule: 25S rRNA (cytosine(2870)-C(5))-methyltransferase (EC 2.1.1.310) (Nucleolar protein 2)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RsmF-B_ferredox →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupNOL1/NOP2/sun N-terminal ferredoxin-like domain(304.137)

TT-groupNOL1/NOP2/sun N-terminal ferredoxin-like domain(304.137.1)

FFamilyRsmF-B_ferredox(304.137.1.3)

Pfam Families

PF22458RsmF-B_ferredox

Methyltr_RsmF/B-like, ferredoxin-like domain

ClanCL0795NSUN_ferredox

External Links

ECOD PDB View: 8V84 RCSB PDB: 8V84 PDBe: 8V84 UniProt: P40991

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure