ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8vdeP41 - ECOD Domain | ECOD

ECOD/Domains/e8vdeP41

e8vdeP41

UID: 005209712

PDB

Range: P4:66-175,P4:199-201,P4:219-220,P4:285-465
PDB: 8VDE chain P4(all domains)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Phage_prot_Gp6 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupAlpha-helical domain in upper collar protein(4038)

HH-groupAlpha-helical domain in upper collar protein(4038.1)

TT-groupAlpha-helical domain in upper collar protein(4038.1.1)

FFamilyPhage_prot_Gp6(4038.1.1.2)

Pfam Families

PF05133SPP1_portal

Phage portal protein, SPP1 Gp6-like

ClanCL0838Phage_portal

External Links

ECOD PDB View: 8VDE RCSB PDB: 8VDE PDBe: 8VDE

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure