ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8vnmB1 - ECOD Domain | ECOD

ECOD/Domains/e8vnmB1

e8vnmB1

UID: 005212672

PDB

Range: B:1-162
PDB: 8VNM chain B(all domains)
UniProt: Q94702 (all domains)

Molecule: Intron-encoded endonuclease I-PpoI (I-Ppo) (EC 3.1.-.-)

3D Structure

Loading viewer...

Related Domains

Browse other domains in zf-His_Me_endon →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupHis-Me finger endonucleases(378)

HH-groupHis-Me finger endonucleases(378.1)

TT-groupHis-Me finger endonucleases(378.1.1)

FFamilyzf-His_Me_endon(378.1.1.6)

Pfam Families

PF05551zf-His_Me_endon

Zinc-binding loop region of homing endonuclease

ClanCL0263His-Me_finger

External Links

ECOD PDB View: 8VNM RCSB PDB: 8VNM PDBe: 8VNM UniProt: Q94702

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure