ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8xmdA5 - ECOD Domain | ECOD

ECOD/Domains/e8xmdA5

e8xmdA5

UID: 005230640

PDB

Range: A:626-628,A:631-658,A:673-714,A:723-761,A:771-775,A:779-789,A:793-875
PDB: 8XMD chain A(all domains)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RNA_pol_Rpb1_4 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupsecond helical domain in RNA-polymerase beta-prime subunit(4958)

HH-groupsecond helical domain in RNA-polymerase beta-prime subunit(4958.1)

TT-groupsecond helical domain in RNA-polymerase beta-prime subunit(4958.1.1)

FFamilyRNA_pol_Rpb1_4(4958.1.1.2)

Pfam Families

PF05000RNA_pol_Rpb1_4

RNA polymerase Rpb1, domain 4

External Links

ECOD PDB View: 8XMD RCSB PDB: 8XMD PDBe: 8XMD

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure